Genome assembly
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runAssembly -o SE_PE -a 50 -l 350 -g -m -ml 20 -cpu 0 -consed ~/db/genome/Eubacteria/NOV_2009_SE/GIST.SE.sff ~/db/genome/Eubacteria/APR_2010_PE/GE6FA8204.sff | runAssembly -o SE_PE -a 50 -l 350 -g -m -ml 20 -cpu 0 -consed ~/db/genome/Eubacteria/NOV_2009_SE/GIST.SE.sff ~/db/genome/Eubacteria/APR_2010_PE/GE6FA8204.sff | ||
(/home/gnusnah/works/assembly_2010_7_8/) | (/home/gnusnah/works/assembly_2010_7_8/) | ||
| + | |||
| + | ==manuals== | ||
| + | Introduction to Newbler (ppt) : 게시판 | ||
Revision as of 02:46, 9 July 2010
Softwares
| Software | Version | Input | Output | Location(machine/folder) |
| Newbler | 2.3(091027_1459) | |||
| Phrap | 0.990329(Phrap0.990329_patch) | |||
| Phrap | 1.090518 |
Logbook
runAssembly -o SE_PE -a 50 -l 350 -g -m -ml 20 -cpu 0 -consed ~/db/genome/Eubacteria/NOV_2009_SE/GIST.SE.sff ~/db/genome/Eubacteria/APR_2010_PE/GE6FA8204.sff (/home/gnusnah/works/assembly_2010_7_8/)
manuals
Introduction to Newbler (ppt) : 게시판
