From CSBLwiki

Contents 1 Gene and Genome database 1.1 origin related genes 1.2 Whole Bacteria Genome 1.3 Blast DB 1.4 KEGG data

Gene and Genome database

origin related genes

• panflam: /home/gnusnah/db/genome/origin_seq
  • Last update: 2011.02.06
  • Source: Ori-Finder

Whole Bacteria Genome

• panflam: /home/gnusnah/db/genome/genomes/Bacteria
  • Last update: 2010.11.17
  • Source: NCBI

Blast DB

• nrdb
  • panflam: /home2/gnusnah/db/nr_db
  • Last update: 2010.08.04
  • Source: NCBI

KEGG data

• pathway, genes, KO
  • panflam: /home2/gnusnah/db/KEGG
  • Last update: 2011.07.27
  • Source: KEGG
  • Download script: /home2/gnusnah/db/SOAPpy_KEGG.py orgname