From CSBLwiki

Revision as of 02:55, 19 January 2011 (view source) Igchoi (Talk | contribs) (→CAZy GH families) ← Older edit		Revision as of 03:10, 19 January 2011 (view source) Igchoi (Talk | contribs) (→CAZy GH families) Newer edit →
Line 27:		Line 27:
	=CAZy GH families=		=CAZy GH families=
	{| align="left" cellpadding=10 cellspacing=0 border=1		{| align="left" cellpadding=10 cellspacing=0 border=1
-	!CAZy class!!Taxa distribution!!Gene name!!Mode!!Clan	+	!CAZy class!!Taxonomic distribution!!Gene name!!Mode!!Clan!!Typical organisms
	|-		|-
-	|GH5||A,B,E|| || ||GH-A	+	|[http://www.cazy.org/GH5.html GH5]||A,B,E|| || ||GH-A ||
	|-		|-
-	|GH6||B,E||CBH-II||non-reducing end(exo) ||	+	|[http://www.cazy.org/GH6.html GH6]||B,E||CBH-II||non-reducing end(exo) || ||
	|-		|-
-	|GH7||E||EG-I, CBH-I, Cellulase C||reducing end(exo) || GH-B	+	|[http://www.cazy.org/GH7.html GH7]||E||EG-I, CBH-I, Cellulase C||reducing end(exo) || GH-B ||
	|-		|-
-	|GH8||	+	|[http://www.cazy.org/GH8.html GH8]||B||Cellulase family D||Endo-, Exo- || GH-D ||
	|-		|-
-	|GH9||	+	|[http://www.cazy.org/GH9.html GH9]||A,B,E||Cellulase family E||Endo-|| ||
	|-		|-
-	|GH44||	+	|[http://www.cazy.org/GH44.html GH44]||B(E)||Cellulase family J||Endo-|| ||''Clostridium''
	|-		|-
-	|GH48||	+	|[http://www.cazy.org/GH48.html GH48]||B,E|| ||Endo-|| ||''Clostridium'',''Hahella''
	|}		|}

---

Revision as of 03:10, 19 January 2011

Contents 1 Mode of actions 1.1 Accessibility 1.1.1 Endoglucanse 1.1.2 Exoglucanase 1.1.3 Mixed 1.2 Processivity 1.3 Synergism 1.4 Substrates 1.4.1 Crystalline cellulose 1.4.2 Non-crystalline cellulose 1.4.3 etc. 2 CAZy GH families

Mode of actions

• (Fungus) "The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: (1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the dissaccharide cellobiose from the non-reducing end of the cellulose polymer chain; (3) Beta-1,4-glucosidases which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose."[1]

Accessibility

Endoglucanse

• e.g. T. reesei EG-1; GH7; CBM1

Exoglucanase

• Reducing end acting exoglucanase (CBH I) from T. reesei; GH7; CBM1
• Non-reducing end acting (CBH II); GH6; CBM1

Mixed

Processivity

Synergism

1. Error fetching PMID 7980450: [Synergism1]

Substrates

Crystalline cellulose

Non-crystalline cellulose

etc.

CAZy GH families

CAZy class	Taxonomic distribution	Gene name	Mode	Clan	Typical organisms
GH5	A,B,E			GH-A
GH6	B,E	CBH-II	non-reducing end(exo)
GH7	E	EG-I, CBH-I, Cellulase C	reducing end(exo)	GH-B
GH8	B	Cellulase family D	Endo-, Exo-	GH-D
GH9	A,B,E	Cellulase family E	Endo-
GH44	B(E)	Cellulase family J	Endo-		Clostridium
GH48	B,E		Endo-		Clostridium,Hahella