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Revision as of 07:34, 6 February 2011 (view source) Gnusnah (Talk | contribs) ← Older edit		Latest revision as of 07:58, 27 July 2011 (view source) Gnusnah (Talk | contribs) (→KEGG data)
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	**Last update: 2010.08.04		**Last update: 2010.08.04
	**Source: NCBI		**Source: NCBI
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		+	==KEGG data==
		+	*pathway, genes, KO
		+	**panflam: /home2/gnusnah/db/KEGG
		+	**Last update: 2011.07.27
		+	**Source: KEGG
		+	**Download script: /home2/gnusnah/db/SOAPpy_KEGG.py orgname

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Latest revision as of 07:58, 27 July 2011

Contents 1 Gene and Genome database 1.1 origin related genes 1.2 Whole Bacteria Genome 1.3 Blast DB 1.4 KEGG data

Gene and Genome database

origin related genes

• panflam: /home/gnusnah/db/genome/origin_seq
  • Last update: 2011.02.06
  • Source: Ori-Finder

Whole Bacteria Genome

• panflam: /home/gnusnah/db/genome/genomes/Bacteria
  • Last update: 2010.11.17
  • Source: NCBI

Blast DB

• nrdb
  • panflam: /home2/gnusnah/db/nr_db
  • Last update: 2010.08.04
  • Source: NCBI

KEGG data

• pathway, genes, KO
  • panflam: /home2/gnusnah/db/KEGG
  • Last update: 2011.07.27
  • Source: KEGG
  • Download script: /home2/gnusnah/db/SOAPpy_KEGG.py orgname