Genome finishing
From CSBLwiki
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==PCR== | ==PCR== | ||
===Arrange Scaffold=== | ===Arrange Scaffold=== | ||
- | + | *Pieces | |
+ | ** 8-1 | ||
+ | ** 8-6 | ||
+ | ** 3-8 | ||
+ | ** 7-8 | ||
+ | ** 8-2-8 | ||
+ | ** 8-5-8 | ||
+ | ** 8-4-8 | ||
===Sequencing=== | ===Sequencing=== |
Revision as of 01:05, 16 August 2010
Contents |
PCR
Arrange Scaffold
- Pieces
- 8-1
- 8-6
- 3-8
- 7-8
- 8-2-8
- 8-5-8
- 8-4-8
Sequencing
- Primer: Product
- 5tail-8head: ok
- 8tail-8head: 4tail-8head
- 7head-3head
- 1tail-3head: 7head-3head
Reference
- Finishing Overview - PDF
- Consed--A Finishing Package (Editor, Autofinish, Autoreport, Autoedit, and Align Reads To Reference Sequence)
- Genomics Education - see some tutorials for finishing with Consed
- Automated Finishing with Autofinish
- Finishing genomes with limited resources: lessons from an ensemble of microbial genomes
- Google Search Result: genome+sequencing+finishing+pcr+protocol