Panflam
From CSBLwiki
(Difference between revisions)
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==Installed Softwares== | ==Installed Softwares== | ||
- | * | + | *2010.06.15 |
- | * | + | **install: wgs-6.1 amd64 |
- | * | + | **install: MUMmer 3.22 |
- | * | + | *2010.6.10 |
- | ** | + | **velvet 0.7.63 |
- | *2009. | + | *2009.10.16 |
- | ** | + | **RNAMMER |
- | * | + | *2009.10.? |
- | ** | + | **HMMER |
- | *2009. | + | *2009.10.7 |
- | ** | + | **diya |
+ | **Perl Module - XML::Simple Data::Merger | ||
+ | **Infernal: inference of RNA alignments | ||
+ | **pfamscan.pl | ||
*2009.09.30 | *2009.09.30 | ||
**Biopython | **Biopython | ||
Line 21: | Line 24: | ||
**blast2 (apt-get으로 설치) [NCBI] | **blast2 (apt-get으로 설치) [NCBI] | ||
**Bioperl | **Bioperl | ||
- | *2009. | + | *2009.09.29 |
- | ** | + | **tRNAscan-SE |
- | * | + | *2009.09.28 |
- | ** | + | **glimmer&ELPH |
- | ** | + | **virtualbox (to install manatee) |
- | + | **Manatee (at virtualbox) | |
- | ** | + | *2009.09.27 |
- | *2009. | + | **X11vnc server&viewer |
- | ** | + | *build-essential gcj gfortran automake ia32-libs g++-multilib libc6-dev-i386 alien rpm libstdc++5 |
- | * | + | *sbackup |
- | ** | + | *NFS |
Revision as of 07:06, 15 June 2010
OS
- Ubuntu Server 9.04
- Intel Xeon Dual-Quadcore (8 cores)
Installed Softwares
- 2010.06.15
- install: wgs-6.1 amd64
- install: MUMmer 3.22
- 2010.6.10
- velvet 0.7.63
- 2009.10.16
- RNAMMER
- 2009.10.?
- HMMER
- 2009.10.7
- diya
- Perl Module - XML::Simple Data::Merger
- Infernal: inference of RNA alignments
- pfamscan.pl
- 2009.09.30
- Biopython
- BER
- cdbtools
- blast2 (apt-get으로 설치) [NCBI]
- Bioperl
- 2009.09.29
- tRNAscan-SE
- 2009.09.28
- glimmer&ELPH
- virtualbox (to install manatee)
- Manatee (at virtualbox)
- 2009.09.27
- X11vnc server&viewer
- build-essential gcj gfortran automake ia32-libs g++-multilib libc6-dev-i386 alien rpm libstdc++5
- sbackup
- NFS