Research topics

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	==[[Synthetic Biology]]==		==[[Synthetic Biology]]==
		+	===iGEM 2012 ===
		+	;[http://2012.igem.org/Team:Korea_U_Seoul/Main]
		+	===iGEM 2011 ===
		+	;[]
	===iGEM 2010===		===iGEM 2010===
	;[http://2010.igem.org/Team:Korea_U_Seoul Team - Korea_U_Seoul]		;[http://2010.igem.org/Team:Korea_U_Seoul Team - Korea_U_Seoul]

---

Revision as of 02:00, 22 November 2012

Contents 1 Computational Genomics by Next Generation Sequencing (NGS) 2 Evolutionary perspective 3 Synthetic Biology 3.1 iGEM 2012 3.2 iGEM 2011 3.3 iGEM 2010 3.4 iGEM 2009 3.5 Protein Engineering 3.6 Bioenergy 3.7 Metabolic Engineering 4 Genome Sequencing 4.1 Project#1 4.2 Project#2 4.3 softwares 5 Network biology 5.1 Protein-Protein Interactions 5.2 Human Disease Network

Computational Genomics by Next Generation Sequencing (NGS)

Evolutionary perspective

Nothing in biology makes sense except in the light of evolution - T. Dobzhansky

SNP analysis & Molecular population genetics

Phylogenomics (comparative genomics)

Evolution of protein domain families

Horizontal Gene Transfer (HGT)

Synthetic Biology

iGEM 2012

[1]

iGEM 2011

[]

iGEM 2010

Team - Korea_U_Seoul

iGEM 2009

Team - KU_Seoul

KU_Seoul

Protein Engineering

aryl acylamidase

Bioenergy

Exploring the CAZy

we are developing new CBM (Carbohydrate Binding Modules) classification system: 3D-Map

CArbohydrate Related Domain database - CARD DB

Protein Domains for Biomass Deconstruction - PDBD DB

Biomass deconstruction

Land biomass

Marine biomass

Agar

Related Enzymes

Related Microbes

Metabolic Engineering

Cellulose utilization

Genome Sequencing

Project#1

• Status

Project#2

• Status

softwares

• Conversion among formats fa_all2std.pl

Network biology

Protein-Protein Interactions

Human Disease Network

• references

1. What is a scale-free network? Sci. Am. (2003) Barabasi
2. What is network biology? Nat. Rev. Genet.(2005) Barabasi