ResourceforHS
From CSBLwiki
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---- | ---- | ||
[[Ncbi rank taxa]] | [[Ncbi rank taxa]] | ||
| + | ---- | ||
| + | [[Genome database]] | ||
| + | ---- | ||
| + | [[Remained]] | ||
| + | ---- | ||
| + | (pseudouridine synthase[Protein Name] OR (pseudouridine[All Fields] AND synthase[All Fields])) AND "Homo sapiens"[porgn] NOT "mitochondrial"[All Fields] | ||
| + | ---- | ||
| + | [http://pathogenomics.bham.ac.uk/blog/2011/05/first-look-at-ion-torrent-data-de-novo-assembly/ Ion torrent assembly comparison] | ||
| + | ---- | ||
| + | *Bibliography | ||
| + | http://www.zotero.org/ | ||
| + | |||
| + | ---- | ||
| + | Matplotlib | ||
| + | *[http://matplotlib.sourceforge.net/api/pyplot_api.html?highlight=color#matplotlib.pyplot.colors Color Alias] | ||
| + | *[http://matplotlib.sourceforge.net/api/pyplot_api.html?highlight=savefig#matplotlib.pyplot.savefig SaveFig] | ||
| + | ---- | ||
| + | [http://www.genome.jp/kegg/soap/doc/keggapi_manual.html KEGG api manual] | ||
Latest revision as of 07:47, 27 July 2011
- Human disease network raw data (물리학과 고광일 교수제공)
- Dive into Python (Book)
- NetworkX Python network analysis tool
- Python: multiple key values in 'dict' type cookbook
- python 대소문자 전환 module : string
- 한글이 깨져 보일 때: View(보기)->Encoding(인코딩)->Korea(한국어)
- Gene Ontology Data
- Human GO annotation Human GO Download
- GO mapping GOA slim mapping
- GO Slim GO Slim categories
- Gene association DB data (NIH) Download
- 먼저 molecular function만 고려해 보거라
- 고광일 교수님 데이터중에서 Gene ID가 Human Go annotation과 일치하는 것이 있으면 그것도 진행하도록 하자
- Conversion of Uniprot id to Unigene id & GO assignment p2g2go.tar.gz
- Minimum Spanning Tree - 전체 네트워크 그래프에서 minimum spanning tree를 구해볼것
- Clique - 전체 네트워크 그래프에서 Cliques들을 구해볼것
- EST analysis
- Hitchhiker's guide for EST anlysis (PDF)
- wiki manual
- VIM
- ab1파일 수정 :%s/\v\s+[0-9]+\s+[0-9]+\s+[0-9]+//
NFS 연결
- panflam에서 버팔로 NAS에 연결
- connect2NFS
#!/bin/sh sudo mount -t cifs -o user=gnusnah,password= //163.152.25.185/gnusnah /home/gnusnah/NFS/
(pseudouridine synthase[Protein Name] OR (pseudouridine[All Fields] AND synthase[All Fields])) AND "Homo sapiens"[porgn] NOT "mitochondrial"[All Fields]
Ion torrent assembly comparison
- Bibliography
Matplotlib
