SB Course
From CSBLwiki
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==Term project== | ==Term project== | ||
===2009 Fall=== | ===2009 Fall=== | ||
| - | * | + | *Reconstructing central carbon pathways in target organims |
**''Shewanella oneidensis'' MR-1 [http://www.genome.jp/kegg-bin/show_organism?menu_type=pathway_maps&org=son KEGG pathway map] | **''Shewanella oneidensis'' MR-1 [http://www.genome.jp/kegg-bin/show_organism?menu_type=pathway_maps&org=son KEGG pathway map] | ||
**''Saccharophagus degradans'' 2-40 [http://www.genome.jp/kegg-bin/show_organism?menu_type=pathway_maps&org=sde KEGG pathway map] | **''Saccharophagus degradans'' 2-40 [http://www.genome.jp/kegg-bin/show_organism?menu_type=pathway_maps&org=sde KEGG pathway map] | ||
Revision as of 09:49, 23 October 2009
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Biomodel database
Running SBML
- SBML softwares - guide table
- KEGG2SBML - KEGG pathway converter to SBML (written in Perl)
R-project
- R-project
- BioConductor - based on R package
Term project
2009 Fall
- Reconstructing central carbon pathways in target organims
- Shewanella oneidensis MR-1 KEGG pathway map
- Saccharophagus degradans 2-40 KEGG pathway map
