XerAB

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Revision as of 08:48, 28 May 2011 (view source) Igchoi (Talk | contribs) (Created page with "==XerAB== ;repeat finder <pre> /irf305.macos.exe NC_002578.fna 2 3 5 75 10 20 20 5 /home/gnusnah/tools/UW/consed/bin/cross_match TVOIRS.fna TACIRS.fna -gap_init -1 -gap_ext -1 -m...") ← Older edit		Latest revision as of 08:49, 28 May 2011 (view source) Igchoi (Talk | contribs) (→XerAB)
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-	==XerAB==	+	==Repeat finder==
-	;repeat finder	+
	<pre>		<pre>
	/irf305.macos.exe NC_002578.fna 2 3 5 75 10 20 20 5		/irf305.macos.exe NC_002578.fna 2 3 5 75 10 20 20 5

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Latest revision as of 08:49, 28 May 2011

Repeat finder

/irf305.macos.exe NC_002578.fna 2 3 5 75 10 20 20 5
/home/gnusnah/tools/UW/consed/bin/cross_match TVOIRS.fna TACIRS.fna -gap_init -1 -gap_ext -1 -minmatch 7 -bandwidth 3 -minscore 20 -alignments -discrep_lists -discrep_tables
/home/gnusnah/tools/UW/consed/bin/cross_match TVOIRS.fna TACIRS.fna -gap_init -1 -gap_ext -1 -minmatch 7 -bandwidth 3 -minscore 20 -alignments