In the PubMed database, full name search is available for publications after 2002. Google Scholar & ORCID
Eor, Ju Young, Chul Sang Lee, Sung Ho Moon, Ju Young Cheon, Duleepa Pathiraja, Byeonghyeok Park, Min Jae Shin, Jae-Young Kim, Sangjong Kim, Youngbae Noh, Yunhan Kim, In-Geol Choi, and Sae Hun Kim. “Effect of Probiotic-Fortified Infant Formula on Infant Gut Health and Microbiota Modulation”. In: FOOD SCIENCE OF ANIMAL RESOURCES 43.4 (2023), pp. 659-673. DOI: 10.5851/kosfa.2023.e26. PMID: 37484007.
Kim, Bogun, Ziayo Meng, Xiaoyue Xu, Seungwoo Baek, Duleepa Pathiraja, In-Geol Choi, and Sejong Oh. “Complete genome sequence of Limosilactobacillus fermentum JNU532 as a probiotic candidate for the functional food and feed supplements”. In: JOURNAL OF ANIMAL SCIENCE AND TECHNOLOGY 65.1 (2023), pp. 271-274. DOI: 10.5187/jast.2022.e91. PMID: 37093930.
Kim, Chul-Hwan, Yeonjae Yoo, Jong Seong Khim, Xiaoyue Xu, Bogun Kim, In-Geol Choi, and Jae-Jin Kim. “Sphingomicrobium sediminis sp. nov., isolated from marine sediment in the Republic of Korea”. In: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 73.4 (2023). DOI: 10.1099/ijsem.0.005847. PMID: 37074128.
Kim, Ji-Yeon, Byeongchan Kang, Soyoung Oh, Yeji Gil, In-Geol Choi, and In Seop Chang. “Genome-Based Reclassification of Strain KIST612, Previously Classified as Eubacterium limosum, into a New Strain of Eubacterium callanderi”. In: JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY 33.8 (2023), pp. 1084-1090. DOI: 10.4014/jmb.2304.04011. PMID: 37218441.
Pathiraja, Duleepa, Junghwan Cho, Junsung Kim, and In-Geol Choi. “Metabarcoding of eDNA for tracking the floral and geographical origins of bee honey”. In: FOOD RESEARCH INTERNATIONAL (OTTAWA, ONT.) 164 (2023), p. 112413. DOI: 10.1016/j.foodres.2022.112413. PMID: 36737994.
Pathiraja, Duleepa, Junghwan Cho, Peter Stougaard, and In-Geol Choi. “Enzymatic Process for the Carrageenolytic Bioconversion of Sulfated Polygalactans into β-Neocarrabiose and 3,6-Anhydro-d-galactose”. In: JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 71.1 (2023), pp. 635-645. DOI: 10.1021/acs.jafc.2c06972. PMID: 36580413.
Pathiraja, Duleepa, Byeonghyeok Park, Bogun Kim, Peter Stougaard, and In-Geol Choi. “Constructing Marine Bacterial Metabolic Chassis for Potential Biorefinery of Red Algal Biomass and Agaropectin Wastes”. In: ACS SYNTHETIC BIOLOGY 12.6 (2023), pp. 1782-1793. DOI: 10.1021/acssynbio.3c00063. PMID: 37265394.
Kim, Bogun, Byoungnam Min, Jae-Gu Han, Hongjae Park, Seungwoo Baek, Subin Jeong, and In-Geol Choi. “Draft Genome Sequence of the Reference Strain of the Korean Medicinal Mushroom Wolfiporia cocos KMCC03342”. In: MYCOBIOLOGY 50.4 (2022), pp. 254-257. DOI: 10.1080/12298093.2022.2109874. PMID: 36158046.
Kim, Chul-Hwan, Yeonjae Yoo, Dongjun Kim, Jong Seong Khim, Duleepa Pathiraja, Bogun Kim, In-Geol Choi, and Jae-Jin Kim. “Aurantiacibacter sediminis sp. nov., a marine bacterium isolated from a tidal flat”. In: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 72.6 (2022). DOI: 10.1099/ijsem.0.005406. PMID: 35666678.
Kim, Hye Won, Byeong Hyeok Park, Hongjae Park, Beom Chang Baek, In-Geol Choi, and Min Suk Rhee. “Corrigendum to "Low-shear modeled microgravity affects metabolic networks of Escherichia coli O157:H7 EDL933: Further insights into space-microbiology" [Food Res. Int. 154 (2022) 111013]”. In: FOOD RESEARCH INTERNATIONAL (OTTAWA, ONT.) 156 (2022), p. 111276. DOI: 10.1016/j.foodres.2022.111276. PMID: 35651099.
Marian, Ioana M, Peter Jan Vonk, Ivan D Valdes, Kerrie Barry, Benedict Bostock, Akiko Carver, Chris Daum, Harry Lerner, Anna Lipzen, Hongjae Park, Margo B P Schuller, Martin Tegelaar, Andrew Tritt, Jeremy Schmutz, Jane Grimwood, et al. “The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune”. In: MBIO 13.3 (2022), p. e0062822. DOI: 10.1128/mbio.00628-22. PMID: 35604096.
Pathiraja, Duleepa, June Wee, Kijong Cho, and In-Geol Choi. “Correction to: Soil environment reshapes microbiota of laboratory-maintained Collembola during host development”. In: ENVIRONMENTAL MICROBIOME 17.1 (2022), p. 20. DOI: 10.1186/s40793-022-00414-4. PMID: 35468816.
— “Soil environment reshapes microbiota of laboratory-maintained Collembola during host development”. In: ENVIRONMENTAL MICROBIOME 17.1 (2022), p. 16. DOI: 10.1186/s40793-022-00411-7. PMID: 35382887.
Wu, Gang, Shingo Miyauchi, Emmanuelle Morin, Alan Kuo, Elodie Drula, Torda Varga, Annegret Kohler, Bang Feng, Yang Cao, Anna Lipzen, Christopher Daum, Hope Hundley, Jasmyn Pangilinan, Jenifer Johnson, Kerrie Barry, et al. “Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales”. In: THE NEW PHYTOLOGIST 233.3 (2022), pp. 1383-1400. DOI: 10.1111/nph.17858. PMID: 34767630.
Yoo, Yeonjae, Hanbyul Lee, Jong Seong Khim, Xiaoyue Xu, Bogun Kim, In-Geol Choi, and Jae-Jin Kim. “Halomonas getboli sp. nov., a halotolerant bacteria isolated from a salt flat”. In: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 72.12 (2022). DOI: 10.1099/ijsem.0.005634. PMID: 36748432.
Choi, Hong Il, Sung-Won Hwang, Jongrae Kim, Byeonghyeok Park, EonSeon Jin, In-Geol Choi, and Sang Jun Sim. “Augmented CO2 tolerance by expressing a single H+-pump enables microalgal valorization of industrial flue gas”. In: NATURE COMMUNICATIONS 12.1 (2021), p. 6049. DOI: 10.1038/s41467-021-26325-5. PMID: 34663809.
Kang, Hyunsoo, Byeonghyeok Park, Soyoung Oh, Duleepa Pathiraja, Ji-Yeon Kim, Seunghyeon Jung, Jiyeong Jeong, Minseok Cha, Zee-Yong Park, In-Geol Choi, and In Seop Chang. “Metabolism perturbation Causedby the overexpression of carbon monoxide dehydrogenase/Acetyl-CoA synthase gene complex accelerated gas to acetate conversion rate ofEubacterium limosumKIST612”. In: BIORESOURCE TECHNOLOGY 341 (2021), p. 125879. DOI: 10.1016/j.biortech.2021.125879. PMID: 34523550.
Kim, Dongjun, Yeonjae Yoo, Jong Seong Khim, Dongmin Yang, Duleepa Pathiraja, Byeonghyeok Park, In-Geol Choi, and Jae-Jin Kim. “Altererythrobacter lutimaris sp. nov., a marine bacterium isolated from a tidal flat and reclassification of Altererythrobacter deserti, Altererythrobacter estronivorus and Altererythrobacter muriae as Tsuneonella deserti comb. nov., Croceicoccus estronivorus comb. nov. and Alteripontixanthobacter muriae comb. nov”. In: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 71.12 (2021). DOI: 10.1099/ijsem.0.005134. PMID: 34874248.
Ko, Hyeok-Jin, Heesang Song, and In-Geol Choi. “Development of a Novel Cell Surface Attachment System to Display Multi-Protein Complex Using the Cohesin-Dockerin Binding Pair”. In: JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY 31.8 (2021), pp. 1183-1189. DOI: 10.4014/jmb.2105.05022. PMID: 34226404.
Kwak, Min-Jin, Min-Young Park, Yong-Soon Choi, Junghwan Cho, Duleepa Pathiraja, Jonggun Kim, Hanbae Lee, In-Geol Choi, and Kwang-Youn Whang. “Dietary sophorolipid accelerates growth by modulation of gut microbiota population and intestinal environments in broiler chickens”. In: JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY 12.1 (2021), p. 81. DOI: 10.1186/s40104-021-00606-x. PMID: 34247658.
Oh, Youn-Lee, In-Geol Choi, Kab-Yeul Jang, Min-Seek Kim, Min Ji Oh, and Ji-Hoon Im. “SNP-Based Genetic Linkage Map and Quantitative Trait Locus Mapping Associated with the Agronomically Important Traits of Hypsizygus marmoreus”. In: MYCOBIOLOGY 49.6 (2021), pp. 589-598. DOI: 10.1080/12298093.2021.2018784. PMID: 35035250.
Pathiraja, Duleepa, Line Christiansen, Byeonghyeok Park, Mikkel Schultz-Johansen, Geul Bang, Peter Stougaard, and In-Geol Choi. “A Novel Auxiliary Agarolytic Pathway Expands Metabolic Versatility in the Agar-Degrading Marine Bacterium Colwellia echini A3T”. In: APPLIED AND ENVIRONMENTAL MICROBIOLOGY 87.12 (2021), p. e0023021. DOI: 10.1128/AEM.00230-21. PMID: 33811026.
Pyo, Min Cheol, In-Geol Choi, and Kwang-Won Lee. “Transcriptome Analysis Reveals the AhR, Smad2/3, and HIF-1α Pathways as the Mechanism of Ochratoxin A Toxicity in Kidney Cells”. In: TOXINS 13.3 (2021). DOI: 10.3390/toxins13030190. PMID: 33800744.
Yoo, Yeonjae, Dongjun Kim, Hanbyul Lee, Jong Seong Khim, Bogun Kim, Dongmin Yang, Duleepa Pathiraja, In-Geol Choi, and Jae-Jin Kim. “Novosphingobium aureum sp. nov., a marine bacterium isolated from salt flat sediment”. In: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 71.7 (2021). DOI: 10.1099/ijsem.0.004930. PMID: 34328829.
Christiansen, Line, Duleepa Pathiraja, Pernille Kjersgaard Bech, Mikkel Schultz-Johansen, Rosanna Hennessy, David Teze, In-Geol Choi, and Peter Stougaard. “A Multifunctional Polysaccharide Utilization Gene Cluster in Colwellia echini Encodes Enzymes for the Complete Degradation of κ-Carrageenan, ι-Carrageenan, and Hybrid β/κ-Carrageenan”. In: MSPHERE 5.1 (2020). DOI: 10.1128/mSphere.00792-19. PMID: 31915221.
Kim, Dongjun, Yeonjae Yoo, Jong Seong Khim, Dongmin Yang, Duleepa Pathiraja, In-Geol Choi, and Jae-Jin Kim. “Muricauda ochracea sp. nov., isolated from a tidal flat in the Republic of Korea”. In: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 70.8 (2020), pp. 4555-4561. DOI: 10.1099/ijsem.0.004312. PMID: 32721276.
Lee, Chang Woo, Saeyoung Lee, Chang-Sook Jeong, Jisub Hwang, Jeong Ho Chang, In-Geol Choi, T Doohun Kim, HaJeung Park, Hye-Yeon Kim, and Jun Hyuck Lee. “Structural insights into the psychrophilic germinal protease PaGPR and its autoinhibitory loop”. In: JOURNAL OF MICROBIOLOGY (SEOUL, KOREA) 58.9 (2020), pp. 772-779. DOI: 10.1007/s12275-020-0292-0. PMID: 32870483.
Lee, Hyeryeong, Yoo Seok Lee, Stacy Simai Reginald, Seungwoo Baek, Eun Mi Lee, In-Geol Choi, and In Seop Chang. “Biosensing and electrochemical properties of flavin adenine dinucleotide (FAD)-Dependent glucose dehydrogenase (GDH) fused to a gold binding peptide”. In: BIOSENSORS & BIOELECTRONICS 165 (2020), p. 112427. DOI: 10.1016/j.bios.2020.112427. PMID: 32729543.
Min, Byoungnam, Hyeokjun Yoon, Julius Park, Youn-Lee Oh, Won-Sik Kong, Jong-Guk Kim, and In-Geol Choi. “Unusual genome expansion and transcription suppression in ectomycorrhizal Tricholoma matsutake by insertions of transposable elements”. In: PLOS ONE 15.1 (2020), p. e0227923. DOI: 10.1371/journal.pone.0227923. PMID: 31978083.
Oh, Youn-Lee, In-Geol Choi, Won-Sik Kong, Kab-Yeul Jang, Min Ji Oh, and Ji-Hoon Im. “Evaluating Genetic Diversity of Agaricus bisporus Accessions through Phylogenetic Analysis Using Single-Nucleotide Polymorphism (SNP) Markers”. In: MYCOBIOLOGY 49.1 (2020), pp. 61-68. DOI: 10.1080/12298093.2020.1850172. PMID: 33536813.
Park, Hongjae and In-Geol Choi. “Genomic and transcriptomic perspectives on mycoremediation of polycyclic aromatic hydrocarbons”. In: APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 104.16 (2020), pp. 6919-6928. DOI: 10.1007/s00253-020-10746-1. PMID: 32572576.
Pathiraja, Duleepa, Juan Byun, Saeyoung Lee, and In-Geol Choi. “Preparation of a ribosomally synthesized fungal peptide toxin precursor and its in-vitro cyclization”. In: JOURNAL OF BIOTECHNOLOGY 308 (2020), pp. 124-129. DOI: 10.1016/j.jbiotec.2019.12.004. PMID: 31837370.
Pathiraja, Duleepa, Youngeun Chun, Junghwan Cho, Byoungnam Min, Saeyoung Lee, Hongjae Park, Juan Byun, and In-Geol Choi. “Novel Monomeric Fungal Subtilisin Inhibitor from a Plant-Pathogenic Fungus, Choanephora cucurbitarum: Isolation and Molecular Characterization”. In: APPLIED AND ENVIRONMENTAL MICROBIOLOGY 86.22 (2020). DOI: 10.1128/AEM.01818-20. PMID: 32887713.
Yoo, Yeonjae, Hanbyul Lee, Bong-Oh Kwon, Jong Seong Khim, Seungwoo Baek, Duleepa Pathiraja, Byeonghyeok Park, In-Geol Choi, Gyu-Hyeok Kim, Beom Seok Kim, and Jae-Jin Kim. “Marinobacter halodurans sp. nov., a halophilic bacterium isolated from sediment of a salt flat”. In: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 70.12 (2020), pp. 6294-6300. DOI: 10.1099/ijsem.0.004530. PMID: 33079031.
Cho, Tae Jin, Dongmin Yang, Byeonghyeok Park, In-Geol Choi, and Min Suk Rhee. “Whole-Genome Sequences of Five Geobacillus stearothermophilus Strains Isolated from Processing Lines of Powdered Infant Formula”. In: MICROBIOLOGY RESOURCE ANNOUNCEMENTS 8.4 (2019). DOI: 10.1128/MRA.01452-18. PMID: 30701238.
Hennessy, Rosanna C, Byeonghyeok Park, Duleepa Pathiraja, In-Geol Choi, Mikkel Schultz-Johansen, and Peter Stougaard. “Draft Genome Sequences of Two Glycoalkaloid-Degrading Arthrobacter Strains Isolated from Green Potato Peel”. In: MICROBIOLOGY RESOURCE ANNOUNCEMENTS 8.16 (2019). DOI: 10.1128/MRA.00226-19. PMID: 31000551.
Jeong, Jin-Ju, Mee Kyung Sang, Dong Wan Lee, In-Geol Choi, and Ki Deok Kim. “Chryseobacterium phosphatilyticum sp. nov., a phosphate-solubilizing endophyte isolated from cucumber (Cucumis sativus L.) root”. In: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 69.3 (2019), pp. 610-615. DOI: 10.1099/ijsem.0.003091. PMID: 30372407.
Kang, Hyunsoo, Byeonghyeok Park, Nicole R Bolo, Duleepa Pathiraja, Shinyoung Park, Minseok Cha, In-Geol Choi, and In Seop Chang. “Gene-Centric Metagenome Analysis Reveals Gene Clusters for Carbon Monoxide Conversion and Validates Isolation of a Clostridial Acetogen for C2 Chemical Production”. In: BIOTECHNOLOGY JOURNAL 14.6 (2019), p. e1800471. DOI: 10.1002/biot.201800471. PMID: 30802355.
Lee, Hyeryeong, Yoo Seok Lee, Soo Kyung Lee, Seungwoo Baek, In-Geol Choi, Jae-Hyung Jang, and In Seop Chang. “Significant enhancement of direct electric communication across enzyme-electrode interface via nano-patterning of synthetic glucose dehydrogenase on spatially tunable gold nanoparticle (AuNP)-modified electrode”. In: BIOSENSORS & BIOELECTRONICS 126 (2019), pp. 170-177. DOI: 10.1016/j.bios.2018.10.013. PMID: 30399519.
Min, Byoungnam and In-Geol Choi. “Practical Guide for Fungal Gene Prediction from Genome Assembly and RNA-Seq Reads by FunGAP”. In: METHODS IN MOLECULAR BIOLOGY (CLIFTON, N.J.) 1962 (2019), pp. 53-64. DOI: 10.1007/978-1-4939-9173-0_4. PMID: 31020554.
Park, Hongjae, Byoungnam Min, Yeongseon Jang, Jungyeon Kim, Anna Lipzen, Aditi Sharma, Bill Andreopoulos, Jenifer Johnson, Robert Riley, Joseph W Spatafora, Bernard Henrissat, Kyoung Heon Kim, Igor V Grigoriev, Jae-Jin Kim, and In-Geol Choi. “Comprehensive genomic and transcriptomic analysis of polycyclic aromatic hydrocarbon degradation by a mycoremediation fungus, Dentipellis sp. KUC8613”. In: APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 103.19 (2019), pp. 8145-8155. DOI: 10.1007/s00253-019-10089-6. PMID: 31482283.
Yoo, Yeonjae, Dong Wan Lee, Hanbyul Lee, Bong-Oh Kwon, Jong Seong Khim, Un Hyuk Yim, Hongjae Park, Byeonghyeok Park, In-Geol Choi, Beom Seok Kim, Seong Woo Jeon, Gyu-Hyeok Kim, and Jae-Jin Kim. “Gemmobacter lutimaris sp. nov., a marine bacterium isolated from a tidal flat”. In: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 69.6 (2019), pp. 1676-1681. DOI: 10.1099/ijsem.0.003375. PMID: 30938664.