Genome assembly2
From CSBLwiki
(Difference between revisions)
(→Lactobacillus genus) |
(→copy # and position of rRNA operon) |
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*position | *position | ||
** 2h,3h, 5t, 7h, 9h, 11h, 13h | ** 2h,3h, 5t, 7h, 9h, 11h, 13h | ||
+ | |||
==Terminus== | ==Terminus== | ||
*scf13 : [http://202.113.12.12/Ori-Finder/out/10951771151.html oriC], 155nt, 56722..56876 nt | *scf13 : [http://202.113.12.12/Ori-Finder/out/10951771151.html oriC], 155nt, 56722..56876 nt |
Revision as of 08:23, 5 September 2010
Contents |
Lactobacillus genus
copy # and position of rRNA operon
- copy # : 4
- position
- 2h,3h, 5t, 7h, 9h, 11h, 13h
Terminus
- scf13 : oriC, 155nt, 56722..56876 nt
- scf10_4
rRNA operon of Other species
Lactobacillus_acidophilus_NCFM | 4 | 2M | |
Lactobacillus_brevis_ATCC_367 | 5 | 2.2M | |
Lactobacillus_casei | 5 | 3M | |
Lactobacillus_casei_ATCC_334 | 5 | 2.9M | |
Lactobacillus_casei_Zhang_uid50673 | 5 | 2.8M | |
Lactobacillus_crispatus_ST1_uid48359 | 4 | 2M | |
Lactobacillus_delbrueckii_bulgaricus | 9 | 1.8M | |
Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365 | 9 | 1.8M | |
Lactobacillus_fermentum_IFO_3956 | 5 | 2.1M | |
Lactobacillus_gasseri_ATCC_33323 | 6 | 1.9M | |
Lactobacillus_helveticus_DPC_4571 | 4 | 2.1M | |
Lactobacillus_johnsonii_FI9785 | 4 | 1.8M | |
Lactobacillus_johnsonii_NCC_533 | 6 | 2M | |
Lactobacillus_plantarum | 5 | 3.3M | |
Lactobacillus_plantarum_JDM1 | 5 | 3.2M | |
Lactobacillus_reuteri_DSM_20016 | 6 | 2M | |
Lactobacillus_reuteri_F275_Kitasato | 6 | 2M | |
Lactobacillus_rhamnosus_GG | 5 | 3M | |
Lactobacillus_rhamnosus_Lc_705 | 5 | 3M | |
Lactobacillus_sakei_23K | 7 | 1.9M | |
Lactobacillus_salivarius_UCC118 | 7 | 1.8M | |
Lactococcus_lactis | 6 | 2.4M | |
Lactococcus_lactis_KF147 | 6 | 2.6M | one more 5s |
Lactococcus_lactis_cremoris_MG1363 | 6 | 2.5M | one more 5s |
Lactococcus_lactis_cremoris_SK11 | 6 | 2.4M | one more 5s |