From CSBLwiki

Revision as of 05:11, 20 September 2010 (view source) Csbl (Talk | contribs) (→Read) ← Older edit		Revision as of 05:24, 20 September 2010 (view source) Csbl (Talk | contribs) (→Read) Newer edit →
Line 55:		Line 55:
	==Read==		==Read==
	*Solexa Illumina reads : single-end, 36bp, 5359073 reads		*Solexa Illumina reads : single-end, 36bp, 5359073 reads
-	*Roche 454 reads 1: paired-end, 270784 reads	+	*Roche 454 reads 1: paired-end, 270784(158188) reads
	*Roche 454 reads 2: paired-end, 364291 reads		*Roche 454 reads 2: paired-end, 364291 reads

---

Revision as of 05:24, 20 September 2010

Contents 1 Lactobacillus genus 1.1 copy # and position of rRNA operon 1.2 Terminus 1.3 rRNA operon of Other species 1.4 Read

Lactobacillus genus

copy # and position of rRNA operon

• copy # : 4
• position
  • 2h,3h, 5t, 7h, 9h, 11h, 13h

Terminus

• scf13 : oriC, 155nt, 56722..56876 nt
• scf10_4

rRNA operon of Other species

Lactobacillus_acidophilus_NCFM	4	2M
Lactobacillus_brevis_ATCC_367	5	2.2M
Lactobacillus_casei	5	3M
Lactobacillus_casei_ATCC_334	5	2.9M
Lactobacillus_casei_Zhang_uid50673	5	2.8M
Lactobacillus_crispatus_ST1_uid48359	4	2M
Lactobacillus_delbrueckii_bulgaricus	9	1.8M
Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365	9	1.8M
Lactobacillus_fermentum_IFO_3956	5	2.1M
Lactobacillus_gasseri_ATCC_33323	6	1.9M
Lactobacillus_helveticus_DPC_4571	4	2.1M
Lactobacillus_johnsonii_FI9785	4	1.8M
Lactobacillus_johnsonii_NCC_533	6	2M
Lactobacillus_plantarum	5	3.3M
Lactobacillus_plantarum_JDM1	5	3.2M
Lactobacillus_reuteri_DSM_20016	6	2M
Lactobacillus_reuteri_F275_Kitasato	6	2M
Lactobacillus_rhamnosus_GG	5	3M
Lactobacillus_rhamnosus_Lc_705	5	3M
Lactobacillus_sakei_23K	7	1.9M
Lactobacillus_salivarius_UCC118	7	1.8M

Read

• Solexa Illumina reads : single-end, 36bp, 5359073 reads
• Roche 454 reads 1: paired-end, 270784(158188) reads
• Roche 454 reads 2: paired-end, 364291 reads