Genome assembly2

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(Assembly Result)
(Assembly Result)
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|Assembler || Contig Type || Number of Contigs || Total bases
|Assembler || Contig Type || Number of Contigs || Total bases
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|ABySS || Large Contig (>500bp) ||  ||  
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|ABySS || Large Contig (>500bp) || 4336 || 4121677 || *very bad
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Revision as of 13:27, 19 October 2010

Contents

Lactobacillus genus

copy # and position of rRNA operon

Terminus

rRNA operon of Other species

NamerRNA operonTotal Lentransposase
Lactobacillus_acidophilus_NCFM42M40
Lactobacillus_brevis_ATCC_36752.2M
Lactobacillus_casei53M
Lactobacillus_casei_ATCC_33452.9M
Lactobacillus_casei_Zhang_uid5067352.8M
Lactobacillus_crispatus_ST1_uid4835942M
Lactobacillus_delbrueckii_bulgaricus91.8M
Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-36591.8M
Lactobacillus_fermentum_IFO_395652.1M
Lactobacillus_gasseri_ATCC_3332361.9M
Lactobacillus_helveticus_DPC_457142.1M 260
Lactobacillus_johnsonii_FI978541.8M
Lactobacillus_johnsonii_NCC_5336 2M
Lactobacillus_plantarum53.3M
Lactobacillus_plantarum_JDM153.2M
Lactobacillus_reuteri_DSM_2001662M
Lactobacillus_reuteri_F275_Kitasato62M
Lactobacillus_rhamnosus_GG53M
Lactobacillus_rhamnosus_Lc_70553M
Lactobacillus_sakei_23K71.9M
Lactobacillus_salivarius_UCC11871.8M

Read

Assembly Result

Assembler Contig Type Number of Contigs Total bases
ABySS Large Contig (>500bp) 4336 4121677 *very bad
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