Genome assembly3
From CSBLwiki
(Difference between revisions)
Line 16: | Line 16: | ||
**5s : all same | **5s : all same | ||
**16s,23s : all different | **16s,23s : all different | ||
+ | =One plasmid= | ||
+ | *length: 5.8 kb | ||
+ | *Has origin? |
Revision as of 07:11, 6 February 2011
Verrucosispora sp.
Contents |
Log
- Illuminia PE -> ABySS -> Fake reads
- Fake read + 454(2007.06,07) -> Newbler
- Fake read + 454(2007.06,07,2010.09) -> Newbler
Read Libraries
- Illumina PE - 2007 8,046,794 X 2
- 454 - 2007.06 SE 249,640, 264,032
- 454 - 2007.07 SE 183,870, 187,022
- 454 - 2010.09 PE 235,916
- fake reads SE 15,379
Primers for gap filling
rRNA operon
- copy number: 3
- 5s : all same
- 16s,23s : all different
One plasmid
- length: 5.8 kb
- Has origin?