Hanseong Roh

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	==Introduction==		==Introduction==
-	*[http://www.cyworld.com/gnusnah/ Cyworld Homepage]	+	[[File:Hanseong.jpg|150px]]
-	*[https://twitter.com/Hanseong_Roh Twitter]	+	*2005~2009 B. Tech in Biotech.: Korea Univ.
-	*Hello	+	===Contact===
-	==Research Interests==	+	*E-mail: roh329@korea.ac.kr, roh329@gmail.com
-	*Human Disease Network	+	*SNS
-	*Microbe Genome Assembly [[Genome1]]	+	**[http://www.cyworld.com/gnusnah/ Cyworld]
-	**L	+	**[https://twitter.com/Hanseong_Roh Twitter]
-	**V	+	**[http://www.facebook.com/hsroh Facebook]
-	**E	+	**[http://compbio.korea.ac.kr/roh329/ Blog]
		+
		+	==Research Topics==
		+	*[[Human disease network]]
		+	**Mobile Application Development (with B. Min) [[http://compbio.korea.ac.kr/~mbnmbn00/]]
		+	*Protein Domain Analysis
		+	**Mobile Application Development (with G. Jang)
		+	**Horizontal Gene Transfer (HGT) Analysis
		+	**[[Cazy |CAZY]]
		+	*Mycoremediation using Fungi (KUC collection) [[http://www.mycopedia.org/]]
		+	*Microbial Genome Assembly & Annotation [[Genome1]]
		+	**<i>Eubacterium limosum</i> KIST612 : [[genome_assembly]]
		+	**<i>Lactobacillus acidophilus</i> 30SC : [[genome_assembly2]]
		+	**<i>Verrucosispora</i> sp. AB-18-032 : [[genome_assembly3]]
		+	**<i>Vibrio</i> sp. strain EJY3
		+	*Xer A binding site prediction
	*iGEM		*iGEM
	**2009 [http://ung.igem.org/Team.cgi?id=271 KU_seoul],[[SynBig]]		**2009 [http://ung.igem.org/Team.cgi?id=271 KU_seoul],[[SynBig]]
-	**2010 [http://2010.igem.org/Team:Korea_U_Seoul Korea_U_Seoul], [http://compbio.korea.ac.kr/synbio Team Board]	+	**2010 [http://2010.igem.org/Team:Korea_U_Seoul Korea_U_Seoul], [http://compbio.korea.ac.kr/synbio Team Board] - Silver medal
		+	**2011 iGEM instructor
		+	*[[Virus genome]]
		+	*[[Short read aligner comparison]]
		+	*RNA sequencing
-	==Useful code==	+	==Publications==
-	python[GUI] code | Remove duplicated item & show unique item list [http://microbio.korea.ac.kr/~roh329/remove_dupl.py remove_dupl.py]	+	*PMID 21036996 [http://jb.asm.org/cgi/content/abstract/193/1/307 Complete Genome Sequencing of A Carbon Monooxide Utilizing Acetogen, Eubacterium limosum KIST612]
		+	*PMID 21478365 [http://jb.asm.org/cgi/content/abstract/193/11/2882 Complete Genome Sequencing of Lactobacillus acidophilus 30SC, Isolated from Swine Intestine]
		+	*PMID 21551311 [http://jb.asm.org/cgi/content/abstract/193/13/3391 Genome Sequence of the Abyssomicin and Proximicin-Producing Marine Actinomycete Verrucosispora maris AB-18-032.]
		+	*PMID 22535948 [http://jb.asm.org/content/194/10/2773.abstract Genome Sequence of Vibrio sp. Strain EJY3, an Agarolytic Marine Bacterium Metabolizing 3,6-Anhydro-l-Galactose as a Sole Carbon Source.]
-	== Resource for Hansung ==	+	==Posters==
-	*[[ResourceforHS]]	+
-	==Reporte Progress==	+	==Management==
-	[http://compbio.korea.ac.kr/wiki/images/0/0b/Chart.JPG GAD]	+	===Computing system===
		+	*[[NAS]]
		+	*[[Panpyro]]
		+	*[[Panflam]]
		+	*[[Compbio]]
-	[http://microbio.korea.ac.kr/tc/roh329/attachment/1054936023.xlsx GAD analysis]	+	== Resources ==
-		+	*[[ResourceforHS]]
-	[http://microbio.korea.ac.kr/tc/roh329/attachment/1175449714.xlsx GAD-2]	+
-		+
-	[http://microbio.korea.ac.kr/tc/roh329/attachment/1251236699.xxx ontology]	+

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Latest revision as of 02:26, 17 July 2012

Contents 1 Introduction 1.1 Contact 2 Research Topics 3 Publications 4 Posters 5 Management 5.1 Computing system 6 Resources

Introduction

• 2005~2009 B. Tech in Biotech.: Korea Univ.

Contact

• E-mail: roh329@korea.ac.kr, roh329@gmail.com
• SNS
  • Cyworld
  • Twitter
  • Facebook
  • Blog

Research Topics

• Human disease network
  • Mobile Application Development (with B. Min) [[1]]
• Protein Domain Analysis
  • Mobile Application Development (with G. Jang)
  • Horizontal Gene Transfer (HGT) Analysis
  • CAZY
• Mycoremediation using Fungi (KUC collection) [[2]]
• Microbial Genome Assembly & Annotation Genome1
  • Eubacterium limosum KIST612 : genome_assembly
  • Lactobacillus acidophilus 30SC : genome_assembly2
  • Verrucosispora sp. AB-18-032 : genome_assembly3
  • Vibrio sp. strain EJY3
• Xer A binding site prediction
• iGEM
  • 2009 KU_seoul,SynBig
  • 2010 Korea_U_Seoul, Team Board - Silver medal
  • 2011 iGEM instructor
• Virus genome
• Short read aligner comparison
• RNA sequencing

Publications

• PMID 21036996 Complete Genome Sequencing of A Carbon Monooxide Utilizing Acetogen, Eubacterium limosum KIST612
• PMID 21478365 Complete Genome Sequencing of Lactobacillus acidophilus 30SC, Isolated from Swine Intestine
• PMID 21551311 Genome Sequence of the Abyssomicin and Proximicin-Producing Marine Actinomycete Verrucosispora maris AB-18-032.
• PMID 22535948 Genome Sequence of Vibrio sp. Strain EJY3, an Agarolytic Marine Bacterium Metabolizing 3,6-Anhydro-l-Galactose as a Sole Carbon Source.

Posters

Management

Computing system

• NAS
• Panpyro
• Panflam
• Compbio

Resources

• ResourceforHS