Primer Verrucosispora gap
From CSBLwiki
Contents |
Primer Naming Format
Scf&SolCtg primer format
Gap primer format
- >[scaffold #]_[Front Contig #]_[Back Contig #]_[primer postion from Gap(Ns)(bp)]_[Forward/Reverse]
ex) >scaffold00001_1_2_1105_F, >scaffold00001_1_2_529_R CONTIG 1 CONTIG 2 ------> 5' 3' --------CTCAGGTCAGGCAGGCGTGATGATCTCTTC----------------NNNNNNNNN---------------------------------------- GTTAGAGGAGAGTGCGGCTGGGCTCCAATCAT 3' 5' <-------
1105bp 529bp
List of primer
primers of scaffold & sole contigs
scf1
>scaffold00001_223_H TTGCGTGGGTTGAAGCAGAGCAAAGCAGTT >scaffold00001_2007_T ATGACCGCCAGGTGACTCTGCAACCCACTC
scf2
scf3
>scaffold00003_1985_H CCGATCTCGTCATGTCCAGCCTGGATGAGT >scaffold00003_1004_T CCAAGTCCGACGGCTCGAAGTTCGGCAAGA
scf4
>scaffold00004_151_H GTTGATCTGCTGAGCGTGATTCGGATAGTT >scaffold00004_548_T CAACATCACCTCGCCGAAGACCGTCTATCT
ctg205
- 23s, 5s
>23s5s_H TGGTGTGGTGTTGTTTGATATGTTGATAGG >23s5s_T ACGTCTCAGCCTACATGTGCCACGGATTTG
ctg231
- 16s
>16s_H CGTGTTACTCACCCGTTCGCCGCTCGAGTA >16s_T TGGCGATTGGGACGAAGTCGTAACAAGGTA
- By Using Primer3
- "Can't find proper primer" means Primer3 couldn't found primer which satisfies several conditions (length, GC contents, Tm, complementarity between primers and complementarity between chromosome and 3' of primer).
primer part 1 - scaffold00001
>scaffold00001_1_2_1105_F CTCAGGTCAGGCAGGCGTGATGATCTCTTC >scaffold00001_1_2_529_R TACTAACCTCGGGTCGGCGTGAGAGGAGATTG >scaffold00001_2_3_751_F CAGAACTGGAGAACGTCCATGCTCGAGAAC >scaffold00001_2_3_1360_R TCGATCACCAGCTCACGGAAGTCCTCGTTG >scaffold00001_3_4_586_F GTCAGTGCCGATCAGGATGTTGTCCAC >scaffold00001_3_4_183_R ATCAACTGCCAGAACTCGTCGGTCCTCATG >scaffold00001_4_5_568_F TACGTCGAGGAACTGGGCGACTTCAAGACC >scaffold00001_4_5_838_R CATGTCGTCGATCTGCACGTTGACCAG >scaffold00001_5_6_1090_F GTTGAAGAAGCTGACCAGTCCGACGAGTAC >scaffold00001_5_6_374_R CGGGTCTTCTTCGAGATGGACATCTACTG >scaffold00001_6_7_939_F ATCAGCGGTTACGTCTGGTGGTGAC >scaffold00001_6_7_870_R CGATCTCCACGTTTGACAGGATGCTCTG >scaffold00001_7_8_818_F GAACTGGAGTTGATGGAGCAGCGCGAAAC >scaffold00001_7_8_545_R ATCAGTTTGATCGGCGAGACGTGCGAGACC >scaffold00001_8_9_346_F CTCGTGCTGATCGTCGAGTACGCCATCTTC >scaffold00001_8_9_358_R ATGGACATGGTCCACCTGGTCATCG >scaffold00001_9_10_1135_F AGACCGGATTGAGTGCTTCCTCTGCTGGTG >scaffold00001_9_10_1408_R CGACCAATTTCCGACGAGGTGACATTC >scaffold00001_10_11_533_F TTCGCCACCACCGGTCTAGGATGAGAGATC >scaffold00001_10_11_191_R ATTCCTCGCGCAGTTGACCCAGTTC >scaffold00001_11_12_354_F AAGGTCAGGATGGCGGTGAACACCTTGGTC >scaffold00001_11_12_345_R ATGTTGTCGCTGACCTTCGCGATACGGGAG >scaffold00001_12_13_1313_F TTTCAGGCTTTGAGGATCGAGGTAAACAGG >scaffold00001_12_13_315_R TCGCATCTTCTCAGCCAGTTCCGAG >scaffold00001_13_14_961_F GTCATCGGACAGCCGATTCTTCGACGACTG >scaffold00001_13_14_1221_R AGTCGTCGAAGCGCAGAAGGTACATGTAGG >scaffold00001_14_15_1407_F CTTGTTTCGATAGCATTACCGCCCAGTAAC >scaffold00001_14_15_533_R GTACTCGTCGAAGGTGGACACGTTCACTC >scaffold00001_15_16_126613_F Can't find proper primer >scaffold00001_15_16_569_R CTTCTACCACGACACACACACCGATCC >scaffold00001_16_17_1785_F CTCGAAGACGTCAACAACCACACCAATCTG >scaffold00001_16_17_478_R CTCGTAACTCTCCATCGGTTCTCCAGTAAC >scaffold00001_17_18_225_F GATCGTGACGAACGTGAAGGTCCAC >scaffold00001_17_18_408_R CAGATCCGGTACAGCTCCTTGTATTCCAG >scaffold00001_18_19_320_F CAGATAGATGGTGAAGTCAGGACGACGG >scaffold00001_18_19_177_R ATGAACTTTCCACCGATGCCGGTCGTCTTC >scaffold00001_19_20_313_F GTGTCGTTGTAGGCGATGAGGAGTTGGTG >scaffold00001_19_20_645_R CTGTCTACAACATCCCCGTCGCACTCCAAC >scaffold00001_20_21_312_F TGTCGTTGTAGGCGACGAGGAGCTGATCAC >scaffold00001_20_21_428_R TCGGACATGTCTTCGACCTGAGTGC >scaffold00001_21_22_243_F AAGGACGGACGTGGACATCGATCAGCAATC >scaffold00001_21_22_1379_R AGGACTCCTGTACGTCGATCACGACGAGTG >scaffold00001_22_23_238_F GTTTCACTCATCGGTGTACCCTCCCGATC >scaffold00001_22_23_244_R GAAGTTCGTCATCGAGAACGTCTCCGTGC >scaffold00001_23_24_410_F ACTGACCACGGTGCAGCTCTACTTCAC >scaffold00001_23_24_1184_R AGCGTGTAGTCGGCGGTATACACCTTC >scaffold00001_24_25_444_F ATTCGACGGGCAGGACGTCAACAAG >scaffold00001_24_25_458_R TAGGTGTGCTCCAGGTAGGTGAGGAAC >scaffold00001_25_26_203_F GTCGAGGGGATCAACACAAGTGGAATCAAG >scaffold00001_25_26_184_R GTACCGTCGACAAGCAACTCCTGATCGTC >scaffold00001_26_27_369_F ATGAGCGAGCAGGTCTTCCTCCTAC >scaffold00001_26_27_706_R GAACACGCCGTAGTTGTTCAGCGTGAAG >scaffold00001_27_28_280_F TGACGTGAGGGGACTACGGATGTAC >scaffold00001_27_28_260_R ACTTCGACAGGTAGGCCTTGCAGAG >scaffold00001_28_29_209_F TCTACGGTGGGTTGCACTGGTTTAGAGAAG >scaffold00001_28_29_357_R TACAGCTGAAGGATCTTCTCGTCGAGGACC >scaffold00001_29_30_1643_F CCGATCCAGGCGAAGATCAGATTGGTC >scaffold00001_29_30_767_R ATCGACATAGCGCTCCAACAGATCGGTGAC >scaffold00001_30_31_237_F CACCACACGTTGTACGTCTTCGTGCTCTAC >scaffold00001_30_31_286_R GACATCCCCCAAGTCTTTCCTCTCATGCTC >scaffold00001_31_32_566_F AAACGAGCCGTACAACGGGCAACTG >scaffold00001_31_32_169_R ATCTTCCTGACCTCGTCGGTGTGGTACTTC >scaffold00001_32_33_266_F AACATTGACAGGGTGGCACGCAGTTCG >scaffold00001_32_33_169_R TTGTCAATGTAGCGTTGACGGGTGCCTGAC >scaffold00001_33_34_795_F GTCGACGACGAGAATCCGGTTCATG >scaffold00001_33_34_365_R GTTCCCTGCTGCTGAACTGGTTCTTCAC >scaffold00001_34_35_1071_F CAGTACGTCATCTTCGACCGGACCATTTG >scaffold00001_34_35_2096_R AGTCGTCGTCGTCGAACATCGTGAC >scaffold00001_35_36_685_F GTCGTTCAGGTTCAGGTAGAACTCGGTGAC >scaffold00001_35_36_0_R Can't find proper primer >scaffold00001_36_37_1073_F GATCGGTTTGCCGCGGTCGTTGTATTCGAC >scaffold00001_36_37_740_R ATACGGCTTCGTCGAGAACCTGACC >scaffold00001_37_38_498_F TTCGACGAACTGTGGCAACGCTTCTCC >scaffold00001_37_38_562_R AGGACGTCATGCACGGTCAACACAC >scaffold00001_38_39_612_F AACATGTCGTTGAGCGCGGCCAGTTTG >scaffold00001_38_39_672_R CTCTTCGACGAGATCATCCAGGTGCTG >scaffold00001_39_40_196_F CACAATTTCATCGATCAACACAAACGCGAG >scaffold00001_39_40_425_R ACCTGCAACTGACTCGGCTGGCTATAGCTG >scaffold00001_40_41_522_F GACTACAAGCCGGAGAACGTGCTCATCTC >scaffold00001_40_41_660_R GTGCAGAAGGGATAGAGGGTGACGTAC >scaffold00001_41_42_205_F ACCGAAGCAGTCGAAGACGGTACAC >scaffold00001_41_42_339_R GTCTTCTTCTGGCCCCGCAACGAGATCATG >scaffold00001_42_43_389_F TAAAATCTGTGATCTGGGCTAACCTTGGGG >scaffold00001_42_43_223_R GTGATCGGTGTGTTCGTGGCTGACCAGTAC >scaffold00001_43_44_440_F CTCGGAGGAAAACGGTGAACAGTCAGCAAC >scaffold00001_43_44_563_R TGAACGCCTCCACCCAGCATTTGATCACAG >scaffold00001_44_45_93801_F Can't find proper primer >scaffold00001_44_45_485_R GTGTTGCGATCGGATTCGTAGCTGAC >scaffold00001_45_46_401_F GGATCAGCTCCGGATAGTTGAAGTCGTC >scaffold00001_45_46_423_R ACAACGAGGACTTCGACAACGGCTTCAAGG >scaffold00001_46_47_370_F GTAAACTCCTGATCTCAGCCGCTCTCGTG >scaffold00001_46_47_845_R CTCGTCGTCTCTGGTGTAGAAGTCGTCCTG >scaffold00001_47_48_1970_F GACGACTACCTGCGTAAACCCTTCGACCTG >scaffold00001_47_48_1044_R CACCAATCTGCTTGTGGGTCTGGTGCTGAC >scaffold00001_48_49_1639_F GATGTTCATCGACCTGGAGAACGTGC >scaffold00001_48_49_244_R CATCTCTCCCGTCAGCTCATCGTTCGAAG >scaffold00001_49_50_1297_F CAGGGTTTCCTGAGCCACCTTGAAC >scaffold00001_49_50_822_R CTGTTCTCCCAGGACCCGATCTTCAACTC >scaffold00001_50_51_227_F CGTGCCATGTTCTGAACGAGAACGATC >scaffold00001_50_51_860_R GTGACCAGCGAGTGAATCTTGTCGCGTTG >scaffold00001_51_52_1410_F GATGTCCACGTCGTACGCCATGCTGTTGTC >scaffold00001_51_52_509_R CCTGATTCACCTGATTCGTCCACCAGTTC >scaffold00001_52_53_361_F GTCATCCACACATGGCATTCTGTGACC >scaffold00001_52_53_353_R AGGATGGCGTAATCCGCGATGATGG >scaffold00001_53_54_414_F TTCTGGAAGACCATCTGCAGACCGATCTCG >scaffold00001_53_54_823_R TACGCGAAGGGACGTTAGAGATGGCAC >scaffold00001_54_55_1250_F CTGGAACCGGATGATGTTGGAGTCCTC >scaffold00001_54_55_175_R TACCGAGGAACTGATCGACCTCTCC >scaffold00001_55_56_239_F CACCTGACCTCTGACAATGAACGCCGAAAG >scaffold00001_55_56_206_R GATTGGCTTCTATACAAACTAAGGTGGCGC >scaffold00001_56_57_412_F GTACTCACGATGGTCCTTCTCCTCGTTG >scaffold00001_56_57_184_R CAAACCGGTGGTCGGGCTGATCATGTATTC >scaffold00001_57_58_1204_F TCATGCTGTCCGTATCCATTTAGGACCTTC >scaffold00001_57_58_939_R TTCTACCGTGCCTACTTCGAGACCGAC >scaffold00001_58_59_788_F CAAAGCAAATCGGAGGGGACATGACG >scaffold00001_58_59_229_R ACACGTTCGTCCGCAACAACGGATG >scaffold00001_59_60_1979_F GTGACCAGCCAGGTCTGTTCGAATCTCAC >scaffold00001_59_60_625_R GAGATCATGTACGCCGACTTCAGCTTCGTG >scaffold00001_60_61_755_F GTACGGTTTCTGACCAACACCGACTCGAAG >scaffold00001_60_61_647_R CCAACATCACCATCACGAACCTCGG >scaffold00001_61_62_285_F TCAGGTTGAGATCGACCATCGCGAG >scaffold00001_61_62_944_R TTGCACCATCAGCTCAGCATCGTCTTCGAC >scaffold00001_62_63_898_F CTGATGATCAAGGTGTTGCGGCTGTC >scaffold00001_62_63_367_R GTTGTAGCCGCCGAAGTCGTTCATGCTGAC >scaffold00001_63_64_711_F ACGTAGTTCCCGACCGTAGAGCAGTTC >scaffold00001_63_64_1286_R CGATAGGTGAGACTCGATGCATGGTTAGTG >scaffold00001_64_65_324_F CTGGTGTGCTTTTCGGTTCGGGTAC >scaffold00001_64_65_297_R AACGCCCACGTCATCCTCGAAGAAC >scaffold00001_65_66_1986_F GATCAGTCCGGCGATCGACGAGTAGAGAAC >scaffold00001_65_66_1292_R GTTGCTGCTGGAAGTGGCATGGGAAAC >scaffold00001_66_67_428_F CTTCGTCACTGGCTGTGTCAAGGTCAAC >scaffold00001_66_67_346_R ACTGTTCCTGCTGTACTCCTCGGTG >scaffold00001_67_68_5122_F Can't find proper primer >scaffold00001_67_68_0_R Can't find proper primer >scaffold00001_68_69_5187_F Can't find proper primer >scaffold00001_68_69_1373_R CTCCTGGTGGGCTCGGTGAAAACCAACATC >scaffold00001_69_70_254_F CTTCGACATGGAGGCAGTGCTTGAGAACTC >scaffold00001_69_70_318_R AGTGAGGAGGAACAGTTCTACAATGGTGTG >scaffold00001_70_71_240_F CATTCGGCGTGGTAAAGACCCACTGGTAC >scaffold00001_70_71_233_R ATCGATGACCCTCCAAGACAGACCTCATTG >scaffold00001_71_72_349_F AACCCACGCATCCCACTCAACGAGCTGAAC >scaffold00001_71_72_0_R Can't find proper primer >scaffold00001_72_73_2964_F Can't find proper primer >scaffold00001_72_73_0_R Can't find proper primer >scaffold00001_73_74_2968_F Can't find proper primer >scaffold00001_73_74_0_R Can't find proper primer >scaffold00001_74_75_356_F GTGTTCACCGGCGTGATGTACAACGACTAC >scaffold00001_74_75_0_R Can't find proper primer >scaffold00001_75_76_788_F GTCGACGTTTCATCACGTCACTGGGTG >scaffold00001_75_76_0_R Can't find proper primer >scaffold00001_76_77_1854_F GTGATCAAGGTGATCGAAGCCCTGC >scaffold00001_76_77_535_R ATCTACAACCACCTGGGCGGCAAGGAGAAC >scaffold00001_77_78_624_F AATCTCATGGGGTGCCTTCGTCGATCGGTGAG >scaffold00001_77_78_349_R CTCGGCAACCGACTGTGGAACAACATC >scaffold00001_78_79_195_F GTAGTTGCACGAGACGGCCATTACCTTG >scaffold00001_78_79_276_R GAAATGCCGTCACTCTCCGTAGATGTCC >scaffold00001_79_80_301_F TACGTTTGGCTCAACACCCCACGCGAGATG >scaffold00001_79_80_212_R GTCGCTGATCATGGTTCGGTAGACGATGTC >scaffold00001_80_81_426_F CACTGCCCAAACCGATCTATCCGACGTTC >scaffold00001_80_81_202_R GATCCAAGCTGTCTTAACGAGGAGTTGCC >scaffold00001_81_82_751_F CAAATCCGGGCACCTCGAACTCAAG >scaffold00001_81_82_233_R AACACCACCACCCCCGAGTAGCAGACAACAAC >scaffold00001_82_83_253_F CAAGGTCATCGTCAGCGGTGGATTG >scaffold00001_82_83_302_R AGATCCGGATACTGCGCTGGGAAAC >scaffold00001_83_84_243_F GTGGGGCAAGTGCTGGAGTTTGATTCAC >scaffold00001_83_84_182_R GTGGACGGACCAGTCGTGATGTTCGATTC >scaffold00001_84_85_414_F GTTTACCCTCGATCCGGCAGATGAAGC >scaffold00001_84_85_726_R GACCCGTCCAACACCTTCGATCAGAGCTTC >scaffold00001_85_86_202_F GTTTAGGAAGTGTGGACACGGCCGGAAGTC >scaffold00001_85_86_191_R CCGAAGTGTGCAAACGTTGTCTTTACGTC >scaffold00001_86_87_218_F TCAACAACCCAGTGAACACCGAGGACGTAC >scaffold00001_86_87_245_R CATTGAGAAAGCGATGTACCGCCACGAGAC >scaffold00001_87_88_204_F GAAGTGATCACGCGATCCACGGGATTCCAC >scaffold00001_87_88_267_R AGCTTCCAGACCCTGGTCAACAGTC >scaffold00001_88_89_1973_F AGTAGCCGATGACCCCGTTGAGTTG >scaffold00001_88_89_463_R CAGGTGTTCAACCTCGCCCAGACCTTCTAC >scaffold00001_89_90_613_F ATGACCTTCGTGAAACTGACCTTCTCGCTG >scaffold00001_89_90_528_R GACAAGGACTCCGCCAAGAAGGACGAATC
primer part 2 - scaffold00003, scaffold00004
>scaffold00003_1_2_276_F GACGTGTACATCTCGAACATCTCGCGG >scaffold00003_1_2_387_R AAAACGGGCGTTCACCGCATGGTAC >scaffold00003_2_3_232_F CAAGGGAGAGTTCCGTTACGACCACAG >scaffold00003_2_3_460_R TTGATCAGCCGGCACAGCAACAAGGTGGTG >scaffold00003_3_4_218_F ACAAGCTCATTGCCTACTAGATCGACTTCG >scaffold00003_3_4_1054_R GCATCGTCCAACGGTAGCCTTCTTTC >scaffold00003_4_5_574_F ATCGACCTGGTGCACGCGAACAACTCCAAG >scaffold00003_4_5_289_R GAAGAAGGCGTTGGAGTGCCACAGTTG >scaffold00003_5_6_195_F ATCTGTTGCCGAATTGGCCTGTACTAGATC >scaffold00003_5_6_263_R ATGGCATCCCTCAACCACTACCACC >scaffold00003_6_7_918_F ATGCTCAGTCCGGGAGTACAGCTCGGTAAC >scaffold00003_6_7_245_R GCATGCTGTTGTTGATGCTGTCCTTCAG >scaffold00003_7_8_365_F ATCCGACGAGTACGACATCCACCTG >scaffold00003_7_8_601_R CAGACCAACTACGCCACAAGCAAGG >scaffold00003_8_9_472_F CTGTTCCAGACCTTCCTCACCGTGCTTGAC >scaffold00003_8_9_218_R CTTATGCCCTGACAGAAGGTGCAAGATCAG >scaffold00003_9_10_376_F CATGCACAAGCAGGACCTCATCGAG >scaffold00003_9_10_212_R TTTCCGTTGAGCCGCCACTCGTACTTGTAG >scaffold00003_10_11_1436_F TGGTCCTGCCGTACTTCCTGATCACCACTG >scaffold00003_10_11_232_R GATGGGACAGACTTCGTACACCGGTTG >scaffold00003_11_12_266_F CTGTATTGATGATCCACTCGCTGCCGCTC >scaffold00003_11_12_1184_R TACAGTGATCGGCCGTTGTTGGAGTGTGTG >scaffold00003_12_13_2070_F CTCCAGCAGGGTTTCATCGATTCGGTAG >scaffold00003_12_13_324_R CTGGACCAGTTCACCCTCCAGATCATG >scaffold00003_13_14_463_F CTGGTGTCACACAACGAAAAGGACCTGAC >scaffold00003_13_14_304_R GAAGAAGTCGTCCTTCTCCTTGACCGACAG >scaffold00003_14_15_137305_F Can't find proper primer >scaffold00003_14_15_518_R AATACCGCTACGGTGCTGGAACCGATGTAC >scaffold00003_15_16_227_F GTTTCTGGACAAGTACGGTTTCGGGACC >scaffold00003_15_16_170_R CTTGAGGCGCTCACTGATGCACTTAAC >scaffold00003_16_17_319_F TCACGTGATCTCCTGATAGGTAGACAGACG >scaffold00003_16_17_503_R TACCTGTGGCCCCAAAGCTACTACCTG >scaffold00003_17_18_314_F TCTGAACGAGACGGAATGGGAGATCCTCAC >scaffold00003_17_18_222_R GACATCACCATCCAGGCAGAGAACATGCTG >scaffold00003_18_19_746_F GTTGCTTCGAATCTGGTGACGGGAG >scaffold00003_18_19_471_R GTATACCGCAACATCGGCGAAATGAAGTC >scaffold00003_19_20_655_F GAAGGAACGGCAACTTTCGGTCACGGTAC >scaffold00003_19_20_485_R CAAGGAGACCGTCTACAAGATCTGGCATC >scaffold00003_20_21_294_F ATCAGCCCCGAGCAATTGACCGACCTGAAC >scaffold00003_20_21_200_R GAAGATCGGCAGCTCCATCGTCTCATC >scaffold00003_21_22_1034_F GAAGTAACCGGTGGTGTTTTCGGCCAG >scaffold00003_21_22_354_R ATCTCGCCGGTTACAAGCAGATCCTC >scaffold00003_22_23_1299_F TTCAGATGGTTAAGGACAGCTTCATGAGCG >scaffold00003_22_23_368_R ACGTGATCGGTGGGAACTTCGACTC >scaffold00003_23_24_235_F CCCAGGGAATATAACGATGGTTCAGGTCAG >scaffold00003_23_24_1163_R GAACTGCTGGTTCATCGAATGGTCGTTGAC >scaffold00003_24_25_268_F CTCGAAGTCCCGGTCAAGAAGATCCTCAC >scaffold00003_24_25_666_R TATCGTTCGCGTCGATGGCCGACAACATTG >scaffold00003_25_26_360_F GAAAGGCTGACCATCTACCCGGAGTAC >scaffold00003_25_26_636_R TGATCCACGTGTCCGTACATCATCGTG >scaffold00003_26_27_1270_F GAAATCAAGATCCTGAACCAGTCCCGGAAG >scaffold00003_26_27_244_R CCCGATTCCTTGTCCTGGAACAGATAGAAG >scaffold00003_27_28_833_F GTACTCGCCGACTTTCCCGTTCTCATC >scaffold00003_27_28_474_R GTACACCTCGTGCTCGGGACACAAATGGTC >scaffold00003_28_29_210_F GTACACGTGCCGTTCCCGTTTCTGGTGAAC >scaffold00003_28_29_173_R ACGGCGTCACGAACAACACCTACTG >scaffold00003_29_30_703_F TCAGCGATTCAGAGGTCCCGATCAGAGGTC >scaffold00003_29_30_1341_R TACCTGCATACCGTACGTGGAGTCG >scaffold00003_30_31_256_F TTCCGGGGATGAGTAGCCGACCAATTGTCC >scaffold00003_30_31_1239_R GATCACCGGTTGGTAGACCAGATCCAG >scaffold00003_31_32_351_F CACAAATTGAACTTGAGCTGGGATGTCAGG >scaffold00003_31_32_565_R CAGGATGACAGTGTGAGTCAGCCATGGAC >scaffold00003_32_33_376_F AGATCGACGAGCTCAACGTCTATCCG >scaffold00003_32_33_1069_R GTCATTCGACACCCACCAGCAACGGATAG >scaffold00003_33_34_1969_F GTCCTCAAGCATCGCAAGCGCAAGGAAAAG >scaffold00003_33_34_485_R CTCCAACTGCTCGGAGAGGAACTTGTAAC >scaffold00003_34_35_491_F GAACGAGACCAGGAGACATAGTGGCGAGTC >scaffold00003_34_35_222_R ATCTCCGCAGTCATATCGGTACGGG >scaffold00003_35_36_707_F AAGTTGAAGGAAATGGGCGAGTTCGTGAAG >scaffold00003_35_36_243_R CAGGTTGAACATCTCCTGGACCAGCGAAC >scaffold00003_36_37_355_F CTGCTCTTCCTCGGCATGCTCATGTTC >scaffold00003_36_37_430_R ATAGCCCGCCCACTGCATGACAAAC >scaffold00003_37_38_542_F CGACTGGGAGTACTACATCGGTAACACC >scaffold00003_37_38_565_R GCACTGCGTGAACTCCCTTTCCATC >scaffold00003_38_39_791_F AACTGTCGACGAAGAACCGCGTCATGAGAG >scaffold00003_38_39_613_R GTACGAGCAGTTCACCAGTTGCGTG >scaffold00003_39_40_351_F CACTTGTCTTCTCCTCCGGATACCTGG >scaffold00003_39_40_333_R CTGATCCGTCATGGCGCACATTCCACGATG >scaffold00003_40_41_416_F GTGGTAGGTCTGTGCCTGGTGGTTATG >scaffold00003_40_41_370_R AAGTAGTGCGGCTCCTGCCATCTTCGTTTG >scaffold00003_41_42_419_F GTAGGTCTGTGCCTGGTGCTGGTGGTTATG >scaffold00003_41_42_166_R GTACCGCCAACACGACGACTCATTC >scaffold00003_42_43_317_F GTTCCTGTCCTCGTGCAGCACAATTCGATC >scaffold00003_42_43_298_R ACCGGGGATCATCGTGGTCTTGTAC >scaffold00003_43_44_737_F ATCGTTCGCAGCGGCATCGATTCAC >scaffold00003_43_44_992_R TGAAGCTGACCAAGCTGGTGGTCTC >scaffold00003_44_45_1117_F CTCTGTGAGTACGTGGAACAGGCGATG >scaffold00003_44_45_224_R AAGATCACCACGGCGTCGACACAGCTCAAC >scaffold00003_45_46_422_F GTGATGCCCTCGGATCCCAGTTCTTCGTAC >scaffold00003_45_46_399_R AACTCGGTCAAGCTCGAGTTCCTGGTG >scaffold00003_46_47_258_F GACCTGCTGAGTGGATCATCAACCTATCG >scaffold00003_46_47_510_R GTTGTAACCCATGGCTGACGAAGTAGGG >scaffold00003_47_48_427_F CATCACGGCGAACAACAACCAGACCTAC >scaffold00003_47_48_271_R GAACAACGGCATGAGGTCCTTGAACATGAC >scaffold00003_48_49_532_F GAAGGGTCAACAGTGAGATCGCCTGGTTC >scaffold00003_48_49_741_R TGTAGCTGCCCTTCTCCTCCTGTTC >scaffold00003_49_50_208_F GTGGTGTGCATCGTGCAGATCCCGTTCTAC >scaffold00003_49_50_975_R AACCCGGAGCCGAAGAGTTCGAGAAAC >scaffold00003_50_51_1445_F TGGCGTACCTGGAGAAGGTGGTTTC >scaffold00003_50_51_439_R CAATGGCACCCTCACATATGGCAGATAATTG >scaffold00004_1_2_381_F GAACACGTCACAACCGTGCTTCCAG >scaffold00004_1_2_1879_R ATCGTCTGGGTCAACACCTGGTTCCTG >scaffold00004_2_3_250_F GTTGAACCGTCTGAACGACCGAGGAAG >scaffold00004_2_3_411_R TGTTGTCGGGGTAGGTGGGTAAACG >scaffold00004_3_4_333_F TGACTTCTCCGACCAGATCGCACACCTGTC >scaffold00004_3_4_675_R GAGCTTCTCCTTGTGCTGGGTCAAC >scaffold00004_4_5_297_F GGGAGGTTGTAGATCACGAACTGGATGTAG >scaffold00004_4_5_180_R CAGAACGAGTCCTACAACGGGAACCTTTC >scaffold00004_5_6_411_F GAGATCATGTCGCTGGGCACCAATC >scaffold00004_5_6_469_R AGCAGAGCACCCGTCTGATGTACAG >scaffold00004_6_7_257_F CGCGTTGAAAAACCGGGCGATATCC >scaffold00004_6_7_545_R GTCTTCGTGGTCAACAAGGCCGATC >scaffold00004_7_8_584_F TGATCAACGAGGCGTGCAACGGTAG >scaffold00004_7_8_419_R ATGATCGACACCGTTACGGCGAGATGG >scaffold00004_8_9_447_F GAACCTGCTGTTCATGGTCGGTCTG >scaffold00004_8_9_234_R ACAGTGGTCTCCGTCTACAGTCCAC >scaffold00004_9_10_1726_F TAGAGGGTCAACGGTTCGTCACCAG >scaffold00004_9_10_313_R GTCAAGGATGACTGCGTGACTGGCTAC >scaffold00004_10_11_783_F AGAGCAGTTCGAGGATGTTGGGGTC >scaffold00004_10_11_256_R GCCGACTTCTACGTACTGCTGTCCATG >scaffold00004_11_12_1607_F TACCGACAAGTGAGAGGACGACGTG >scaffold00004_11_12_704_R GACCTGATCGCGGTGATTGGTTGAC >scaffold00004_12_13_750_F TCGATGGACATGCTCTCCTCCGAGATCGTC >scaffold00004_12_13_895_R TATGCGAGCGTCCGAAAAAGATCGACCAGC >scaffold00004_13_14_550_F GAGCACATCAAGATCACTGACAATGGGATC >scaffold00004_13_14_243_R AACACTCCGAAATCCGCTGGCTCTC >scaffold00004_14_15_556_F CTGGTGGGACTCGTTGAGCATCCAATG >scaffold00004_14_15_220_R CCGAGGGAAAGAACCGGACATTGTG >scaffold00004_15_16_1515_F CTTCACCGGCCTGTTCTTCGTCATCAC >scaffold00004_15_16_167_R CAGTACCTGTGGCGTCACACGCGATAAGAG >scaffold00004_16_17_236_F GGTTCGACACCAGGATTTCGAGGTCAC >scaffold00004_16_17_467_R GATCTGGTTCCACATCTGTCCCTGGTG >scaffold00004_17_18_420_F CCTGAGGCACAAGTCAGGGTATCGATC >scaffold00004_17_18_720_R CCAACATCAAGAGCCACCACAACGTC >scaffold00004_18_19_226_F GTGTGATCGACACGGTTACGTCGAAG >scaffold00004_18_19_492_R TTAACAGGGGGCCCTTCCTTCAACACGGTC >scaffold00004_19_20_273_F GTCTCCTTGGTCGAGGTGCTGTTCTGAGTC >scaffold00004_19_20_878_R GACGAGCAACTGGACTCGCTGAACAAG >scaffold00004_20_21_2075_F AACTCAAGTAGACCTACCGCAAGCAGGTCGGACG >scaffold00004_20_21_521_R TGAAGATCACCCAGGATCTCAAGGAGTACG >scaffold00004_21_22_386_F GAAGACTTCGCCACCGAATACCTCAGC >scaffold00004_21_22_182_R TTCGACGTACACACCACCCTCGCCGTAATC >scaffold00004_22_23_594_F AATTCAGCGGACAGCGGTACGAGGGTGTAG >scaffold00004_22_23_1225_R AACAGGACCTGCTCGACAACAAGATCAAG >scaffold00004_23_24_720_F TCCACCGGAACATGGGTGATACTCGAC >scaffold00004_23_24_552_R GTTGCCTTTGCACAGGTAGATCCCG >scaffold00004_24_25_667_F CAAGCCATGTCGAAGCAGCACTACTC >scaffold00004_24_25_322_R AAGCACCTGCTGTTCACAAGCGAACTGATC >scaffold00004_25_26_542_F GCAGATCGACGAGTACCTGGAGTTCTAC >scaffold00004_25_26_247_R AGGAGTCCGACCATGAAGATCAGGAAGATC >scaffold00004_26_27_255_F GATCGTTCGACTACCCACAATCCGCAGATC >scaffold00004_26_27_671_R GGTAGAGCAGCCATTCCAGTTCCTGTG >scaffold00004_27_28_577_F CTGTTCACCGAGGAGGGCGAGTTCTTCTTC >scaffold00004_27_28_485_R GAAAACGGGGTGTTCCAGCTTCATCGCTTC >scaffold00004_28_29_1409_F AACCGACACACCTGCAGTTGCCGTACCAAC >scaffold00004_28_29_207_R TACTCCGGGATAAGCAAGGCTGAGCTG >scaffold00004_29_30_278_F CATTTGTGACACCTGTCCAGCAGTACG >scaffold00004_29_30_264_R TCTGGTGAGCCGACAGGTATTCCTC >scaffold00004_30_31_444_F ACCTTCTTGCTCTTACGGCCCACCTTG >scaffold00004_30_31_739_R GAGTACGTCAAGTTCATTTTCGCCACCAC