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	==Protocols==		==Protocols==
-	*[[Molecular biology]]	+	;[[Molecular biology]]
-	*[[Protein biochemistry]]	+
-	*[[Chemistry]]	+
-	==Part list==	+	;[[Protein biochemistry]]
-	#[[Plasmids]]	+
-	#[[Strains]]	+
-	#[[Parts Registry]]	+
-	==X-ray crystallography==	+	;[[Chemistry]]
-	*Related programs are installed at ''panflam'' (linux machine; 2 CPU (8 cores))	+
-	<pre>/home/x-ray</pre>	+	==CSBL Part list==
-	*[[X-ray programs]]	+	;[[Plasmids]]
-	*Methods	+
-	**[[Molecular replacement]]	+	;[[Strains]]
		+
		+	;[[Parts Registry]]
		+
		+	==[[X-ray programs|X-ray Software@CSBL]]==
		+	;Installed at panflam and panpyro (cluster)
	==Computing resources==		==Computing resources==
-	#[[Compbio]]	+	;[[Compbio]]
-	#[[Microbio]]	+
-	#[[Panpyro]]	+	;[[Microbio]]
-	#[[Panflam]]	+
		+	;[[Panpyro]]
		+
		+	;[[Panflam]]
	==Unix & Programming==		==Unix & Programming==
-	===Unix===	+	===[[Unix]]===
-	*[https://help.ubuntu.com/community/InstallingCompilers Installing Compilers]	+	===[[Web]]===
-	*[[SSH]] - how to connect the Lab. PC from your home	+	===[[Python]]===
-	*X11 connection	+	;[http://biohackers.net/wiki/BioPythonStudy BioHacksNet - 한글번역]
-	**Easy safe way is to use SSH's X forwarding:	+
-	<pre>ssh -X me@remotemachine</pre>	+
-	*Your display will look to the remote machine like:	+
-	<pre>echo $DISPLAY	+
-	localhost:10.0	+
-	firefox --display=$DISPLAY &	+
-	</pre>	+
-	''xhost/export DISPLAY''	+
-	*On your local machine:	+
-	<pre>xhost + remotemachine</pre>	+
-	*On the remote machine:	+
-	<pre>export DISPLAY=localhost:0.0</pre>	+
-	*After you're done, remove remote machine access from your xhost:	+
-	<pre>xhost -</pre>	+
-	*SCIM - [http://www.ubuntu.or.kr Input Hangul]	+	;[http://openwetware.org/wiki/BE.180  BE.180 Biological Engineering Programming] - Synthetic biology@MIT Check "Unix&Python" tutorials!
-	*Linux (Unix) [http://hancoma.springnote.com/pages/621424.xhtml commands]	+	:[[Media:python_sheet.pdf|Python Cheat Sheet]]
-	*[http://tldp.org/  The Linux Document Projects] - Numerous useful documents & tutorials are available	+	:[[Media:unxpython_tut_06.pdf|Unix&Python tutorial]]
-	*Change locale (language) for 'panpyro'	+
-	<pre>bash shell:	+
-	export LC_ALL=en_GB.ISO8859-1	+
-	export LANG=en_GB.ISO8859-1	+
-	</pre>	+
-	===Python===	+	;[http://bonsai.ims.u-tokyo.ac.jp/~mdehoon/software/cluster/ Pycluster]: Open source Clustering software
-	*[http://openwetware.org/wiki/BE.180  BE.180 Biological Engineering Programming] - Synthetic biology@MIT Check "Unix&Python" tutorials!	+
-	**[[Media:python_sheet.pdf|Python Cheat Sheet]]	+	;Tip
-	**[[Media:unxpython_tut_06.pdf|Unix&Python tutorial]]	+	:[http://adnoctum.tistory.com/500 Drag&Drop]
	===Applications===		===Applications===
-	*[[MySQL|MySQL]]	+	;[[MySQL|MySQL]]
-	*[[Matlab|Matlab]]	+
-	*[[R|R-project]]	+	;[[Matlab|Matlab]]
-	----	+
-	*[http://www.redbrick.dcu.ie/~noel/ECwheel.html Hypergraph: EC class]	+	;[[R|R-project]]
		+
		+	;[http://www.redbrick.dcu.ie/~noel/ECwheel.html Hypergraph: EC class]
		+
		+	;[http://en.wikipedia.org/wiki/Social_network_analysis_software SNA softwares]
		+
		+	=== mediawiki ===
		+	;[http://www.mediawiki.org/wiki/Manual:Extensions/ko Extension]
	==Windows==		==Windows==
-	*MS-Word - [http://office.microsoft.com/ko-kr/word/HA012186901042.aspx 편집시 변경내용 추적]	+	;MS-Word - [http://office.microsoft.com/ko-kr/word/HA012186901042.aspx 편집시 변경내용 추적]
		+
		+	==[[Reading, Writing and Speaking|Reading, Writing and Speaking]]==

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Latest revision as of 04:34, 10 October 2012

Contents 1 Protocols 2 CSBL Part list 3 X-ray Software@CSBL 4 Computing resources 5 Unix & Programming 5.1 Unix 5.2 Web 5.3 Python 5.4 Applications 5.5 mediawiki 6 Windows 7 Reading, Writing and Speaking

Protocols

Molecular biology

Protein biochemistry

Chemistry

CSBL Part list

Plasmids

Strains

Parts Registry

X-ray Software@CSBL

Installed at panflam and panpyro (cluster)

Computing resources

Compbio

Microbio

Panpyro

Panflam

Unix & Programming

Unix

Web

Python

BioHacksNet - 한글번역

BE.180 Biological Engineering Programming - Synthetic biology@MIT Check "Unix&Python" tutorials!

Python Cheat Sheet

Unix&Python tutorial

Pycluster

Open source Clustering software

Tip

Drag&Drop

Applications

MySQL

Matlab

R-project

Hypergraph: EC class

SNA softwares

mediawiki

Extension

Windows

MS-Word - 편집시 변경내용 추적

Reading, Writing and Speaking